CDS
| Accession Number | TCMCG066C23294 |
| gbkey | CDS |
| Protein Id | XP_034600808.1 |
| Location | join(2866320..2866577,2866827..2866922,2867030..2867152,2867601..2867690,2867772..2867900,2867990..2868127,2868251..2868295,2868377..2868468,2868543..2868660,2868794..2868885,2868972..2869062,2869145..2869236,2869363..2869691,2869796..2869824) |
| Gene | LOC117861378 |
| GeneID | 117861378 |
| Organism | Setaria viridis |
Protein
| Length | 573aa |
| Molecule type | protein |
| Topology | linear |
| Data_file_division | PLN |
| dblink | BioProject:PRJNA633601 |
| db_source | XM_034744917.1 |
| Definition | nucleolin 1-like [Setaria viridis] |
EGGNOG-MAPPER Annotation
| COG_category | A |
| Description | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
| KEGG_TC | - |
| KEGG_Module | - |
| KEGG_Reaction | - |
| KEGG_rclass | - |
| BRITE |
ko00000
[VIEW IN KEGG] ko00001 [VIEW IN KEGG] ko03009 [VIEW IN KEGG] ko03036 [VIEW IN KEGG] |
| KEGG_ko |
ko:K11294
[VIEW IN KEGG] |
| EC | - |
| KEGG_Pathway |
ko05130
[VIEW IN KEGG] map05130 [VIEW IN KEGG] |
| GOs |
GO:0005575
[VIEW IN EMBL-EBI] GO:0005622 [VIEW IN EMBL-EBI] GO:0005623 [VIEW IN EMBL-EBI] GO:0005634 [VIEW IN EMBL-EBI] GO:0005730 [VIEW IN EMBL-EBI] GO:0031974 [VIEW IN EMBL-EBI] GO:0031981 [VIEW IN EMBL-EBI] GO:0043226 [VIEW IN EMBL-EBI] GO:0043227 [VIEW IN EMBL-EBI] GO:0043228 [VIEW IN EMBL-EBI] GO:0043229 [VIEW IN EMBL-EBI] GO:0043231 [VIEW IN EMBL-EBI] GO:0043232 [VIEW IN EMBL-EBI] GO:0043233 [VIEW IN EMBL-EBI] GO:0044422 [VIEW IN EMBL-EBI] GO:0044424 [VIEW IN EMBL-EBI] GO:0044428 [VIEW IN EMBL-EBI] GO:0044446 [VIEW IN EMBL-EBI] GO:0044464 [VIEW IN EMBL-EBI] GO:0070013 [VIEW IN EMBL-EBI] |
Sequence
| CDS: ATGGGCAAGTCCAACAAGAAGGCGGCGGCGGCGGCCGTGGCGGCGGCGCCCGCAGCGGTGCCCAAGGGGAAGAAGCGGGATGCGGCTGACGAGATCGAGAAGGCGGTGAGCGCCAAGAAGCAGAAGGCAGCGCCGCCGGCGAAGGCCGTGCCGCCGCCCAAGGTGGACGCCAAGAAGGCCAAGAAGCAGCCGCCGCCCAAGAAGGCCGAGAGCAGCAGCAGCGGCTCGGAGGAGGAGGAATCCGAGTCCGAAGAGGAGGTTAAGGTGCAAACAAAGAAGGCCCTTCCTGCCAAGACTGTCAAACCAGAGTCTAGCGATGATGGCAGCAGTGATGAGACCTCTGAATCTGATGAGGAACCTGCAAAGAAGCCTGCTGCTAAACCATCGGCCACAATTGCCAAAAATGGTTCAAAGAAAGGCAAGCAAGAGAGCAGCAGCGATGAGAGTGGTTCTGATGATGAGTCGAGTGAAGATGATGAAGCACCTGCCAAGCCTAAGGCTCCTGCAGTGGCTGCCAAAAAGGAAGATTCCAGTGAAAGTGAGTCAGAGAGTGATTCTGAGGATGAGGATAAAAGTAAAACTGCAAAAGTAGCTCAGCCTGCCAAGAGAGCTGCTTCTAAGATGAGTGATGACTCAGACAGTGATGATTCAGATAGTGATGATAGCGATGAAGAGCCTCCACAAAAGAAGCAGAAGGACACAGCACCTTCTGCTGCTGCAAAAGCTACTGCTGCAAAGAAAGAAACCAGCAGTGATGATGAGAGCGACGATGAGAGTGATGAAGACAGTGAAGAGGACGAAGAGGATGAAGAGCCTGCTAAAACTCCAAAGAAGGAAGCACCTGCTCTCACCTCTGGAAAGCAAAGTGCTACCAAAGAACCTAAAACGCCTATGGACACCCAAAGTCAAGCAACTGGATCAAAGACCCTTTTTATGGCAAACGTCCCCTTCAGAGCTGAACTTGAGGATGTGAAAGAATTTTTTGAGGCGGCTGGCGAGGTTGTTGATGTTCGTTTTCCTGTGTATGAAGATGGCAGTCGTAAAGGTTTTTGCTATGTTGAATTTGTTTCTGCCGAAGCTGCCAAGAAGGCTTGTGAAGAGATGAGTGGAAAAGAGATGCAGGGTCGTGCTGTAAGACTTGACTTTGCTCAGGAAAGAAATGCGTACACTCCTCGCAGTGGCAACGACACTGGATCTTTCCAGAAGCCAGTTAGGGGTGCCAGCAGCTCTGTATTTATCAGGGGTTTTGATAAAAATCTTGAAGAGGACAAGATCCGAAGCTCTCTTGAACAACATTTTGGTGAGTGCGGTGAGATAACAAGGGTCTCAATTCCAACGGATTATGAGACTGGTGCAGTCAAAGGAATAGCATACTTGGACTTCAAGGACCAGGATTCCATGTCGAAAGCCCTTGAGCTCAGTGGCTCTGACATTGGTGGCTATGAGCTGTTTGTTGATGAAGCCAAGCCAAAAGGCGATGGCCAGCGTGGTGGTGGCAGATCCGGAGGCAGATCTGGTGGCAGATTTGGTGAACGGTCTGGCGGCAGGCGTGGTGGTGGTGGCAGATTCGGTGACCGGTCCGGTGGCAGGGACAGCGGCGGTAGATTTGGCCGAGGTGGTGGTGGTAGGGGTGGTAACCGCGGCGGTGGCCGTGGCTTTGGTAACAGGCCGAGCTTTGGAGCGGCTAGTGCAGGAAAGAAGACAACCTTTGGTGATGATTAG |
| Protein: MGKSNKKAAAAAVAAAPAAVPKGKKRDAADEIEKAVSAKKQKAAPPAKAVPPPKVDAKKAKKQPPPKKAESSSSGSEEEESESEEEVKVQTKKALPAKTVKPESSDDGSSDETSESDEEPAKKPAAKPSATIAKNGSKKGKQESSSDESGSDDESSEDDEAPAKPKAPAVAAKKEDSSESESESDSEDEDKSKTAKVAQPAKRAASKMSDDSDSDDSDSDDSDEEPPQKKQKDTAPSAAAKATAAKKETSSDDESDDESDEDSEEDEEDEEPAKTPKKEAPALTSGKQSATKEPKTPMDTQSQATGSKTLFMANVPFRAELEDVKEFFEAAGEVVDVRFPVYEDGSRKGFCYVEFVSAEAAKKACEEMSGKEMQGRAVRLDFAQERNAYTPRSGNDTGSFQKPVRGASSSVFIRGFDKNLEEDKIRSSLEQHFGECGEITRVSIPTDYETGAVKGIAYLDFKDQDSMSKALELSGSDIGGYELFVDEAKPKGDGQRGGGRSGGRSGGRFGERSGGRRGGGGRFGDRSGGRDSGGRFGRGGGGRGGNRGGGRGFGNRPSFGAASAGKKTTFGDD |